Package: PhysioPreprocess 0.2.0

Yusuke Matsui

PhysioPreprocess: Preprocessing Functions for PhysioExperiment Objects

Provides preprocessing functions for physiological signal data including digital filters (Butterworth, notch), resampling, artifact detection, ICA-based artifact removal, and preprocessing pipelines.

Authors:Yusuke Matsui

PhysioPreprocess_0.2.0.tar.gz
PhysioPreprocess_0.2.0.zip(r-4.7-any)PhysioPreprocess_0.2.0.zip(r-4.6-any)PhysioPreprocess_0.2.0.zip(r-4.5-any)
PhysioPreprocess_0.2.0.tgz(r-4.6-any)PhysioPreprocess_0.2.0.tgz(r-4.5-any)
PhysioPreprocess_0.2.0.tar.gz(r-4.7-any)PhysioPreprocess_0.2.0.tar.gz(r-4.6-any)
PhysioPreprocess_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
PhysioPreprocess/json (API)

# Install 'PhysioPreprocess' in R:
install.packages('PhysioPreprocess', repos = c('https://x-biosignal.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/x-biosignal/physiopreprocess/issues

On CRAN:

Conda:

3.00 score 25 exports 20 dependencies

Last updated from:8dc10e24a1. Checks:7 WARNING, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64WARNING233
source / vignettesOK216
linux-release-x86_64WARNING277
macos-release-arm64WARNING134
macos-oldrel-arm64WARNING178
windows-develWARNING177
windows-releaseWARNING176
windows-oldrelWARNING162
wasm-releaseOK112

Exports:applyPipelineassaySamplingRatesbaselineCorrectbutterworthFiltercreatePipelinedecimatedetectBadChannelsdetrendSignaldetrendSignalsfilterSignalsfirFiltergetCurrentReferenceicaDecomposeicaRemoveinterpolateinterpolateBadChannelsisAverageReferencednotchFilterrejectBadEpochsremoveBaselineremoveICAComponentsrereferenceresamplerunICAsetAssaySamplingRate

Dependencies:abindBiobaseBiocGenericsDelayedArraygenericsGenomicRangesIRangeslatticeMASSMatrixMatrixGenericsmatrixStatsPhysioCoreS4ArraysS4VectorsSeqinfosignalSparseArraySummarizedExperimentXVector

ICA-Based Artifact Removal
Introduction | Setup | Creating Example Data | Workflow 1: Built-In ICA | Step 1: Decompose into Independent Components | Step 2: Identify Artifact Components | Step 3: Remove Artifact Components | Workflow 2: fastICA Package | Step 1: Run ICA | Step 2: Remove Components | Detecting Bad Channels | Interpolating Bad Channels | Recommended Preprocessing Order | Choosing the Number of Components | Summary | References
Rendered fromica-artifact-removal.Rmdusingknitr::rmarkdown

Last update: 2026-07-05
Started: 2026-07-05

Signal Preprocessing Guide
Introduction | Setup | Creating Example Data | Filtering | Moving Average Filter | Butterworth Filter | FIR Filter | Notch Filter | Resampling | Arbitrary Resampling | Integer-Factor Decimation | Integer-Factor Interpolation | Re-Referencing | Average Reference | Single Channel Reference | Linked Reference | Checking the Reference | Detrending | Linear and Mean Detrending | Alternative Detrending | Baseline Removal | Preprocessing Pipelines | Creating a Pipeline | Applying a Pipeline | Summary | References
Rendered frompreprocessing-guide.Rmdusingknitr::rmarkdown

Last update: 2026-07-05
Started: 2026-07-05