Changes in version 1.0.0                        

New Features

  - PhysioExperiment S4 class extending SummarizedExperiment with
    samplingRate slot
  - File I/O: readEDF(), readBrainVision(), readGDF(), readPhysioHDF5(),
    readBIDS(), readCSV(), readMAT() and corresponding write functions
  - Generic I/O dispatcher: readPhysio(), writePhysio() with automatic
    format detection
  - Signal processing: filterSignals(), butterworthFilter(),
    firFilter(), notchFilter()
  - FFT and time-frequency: fftSignals(), spectrogram(),
    waveletTransform(), bandPower()
  - Epoching: epochData(), epochSliding(), averageEpochs(),
    grandAverage()
  - Artifact handling: detectArtifacts(), detectBadChannels(),
    icaDecompose(), icaRemove()
  - Re-referencing: rereference() with average, channel, and REST
    support
  - Resampling: resample(), decimate()
  - Connectivity: coherence(), plv(), pli(), wPLI(),
    connectivityMatrix()
  - Network analysis: adjacencyMatrix(), thresholdNetwork(),
    nodeDegree(), clusteringCoefficient(), globalEfficiency(),
    smallWorldness(), modularity()
  - Statistical testing: tTestEpochs(), anovaEpochs(),
    clusterPermutationTest()
  - SPM1D: spmTTest(), spmPairedTTest(), spmAnova()
  - Visualization: plotSignal(), plotMultiChannel(), plotPSD(),
    plotERP(), plotSpectrogram(), plotTopomap(), plotNetwork()
  - DuckDB integration: connectDatabase(), registerExperiment(),
    queryExperiments()
  - Channel management: channelInfo(), pickChannels(), dropChannels(),
    renameChannels(), setChannelTypes()
  - Event system: PhysioEvents class with getEvents(), addEvents(),
    eventQuery()
  - NA handling: checkNA(), handleNA(), replaceNA(), fillEdgeNA()
  - C++ acceleration via Rcpp/RcppArmadillo for network metrics and SPM
    statistics
  - React-based GUI with Plumber REST API backend
  - HDF5-backed arrays for large datasets