Package: PhysioExperiment
Title: Unified Analysis of Physiological Signals
Version: 1.0.0
Authors@R: 
    person(given = "Yusuke",
           family = "Matsui",
           role = c("aut", "cre"),
           email = "mail.to.matsui@gmail.com")
Description: A comprehensive R/Bioconductor framework for physiological
        signal analysis. Provides a unified data model
        (PhysioExperiment class extending SummarizedExperiment) for
        multi-modal sensor signals (EEG, EMG, ECG, IMU, MoCap).
        Includes file I/O (EDF, BDF, BrainVision, GDF, HDF5, BIDS, CSV,
        MATLAB), database integration (DuckDB), signal preprocessing
        (filtering, artifact removal, epoching), time-frequency
        analysis, connectivity analysis, network metrics, statistical
        testing (SPM1D, permutation tests), and publication-quality
        visualization.
Depends: R (>= 4.2)
Imports: methods, SummarizedExperiment, S4Vectors, DelayedArray,
        HDF5Array, rhdf5, DBI, signal, abind, ggplot2, jsonlite,
        parallel, Rcpp (>= 1.0.0), RcppArmadillo
Suggests: duckdb, R.matlab, testthat (>= 3.2.0), knitr, rmarkdown,
        pkgdown, plumber (>= 1.2.0), later, callr, covr
biocViews: Software, TimeCourse, Preprocessing
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
VignetteBuilder: knitr
LinkingTo: Rcpp, RcppArmadillo
URL: https://github.com/x-biosignal/PhysioExperiment,
        https://x-biosignal.r-universe.dev/PhysioExperiment
BugReports: https://github.com/x-biosignal/PhysioExperiment/issues
Collate: 'PhysioExperiment-class.R' 'PhysioExperiment-accessors.R'
        'PhysioExperiment-methods.R' 'channels.R' 'events.R'
        'event-query.R' 'utils-signal.R' 'utils-na.R' 'io-readwrite.R'
        'io-edf.R' 'io-brainvision.R' 'io-gdf.R' 'io-hdf5.R'
        'io-bids.R' 'io-csv.R' 'io-matlab.R' 'db-interface.R'
        'db-schema.R' 'ops-filter.R' 'ops-filters-advanced.R'
        'ops-fft.R' 'ops-rereference.R' 'ops-artifact.R' 'ops-epoch.R'
        'ops-epoch-sliding.R' 'ops-resample.R' 'ops-timefreq.R'
        'ops-connectivity.R' 'ops-network.R' 'stats-tests.R'
        'stats-spm.R' 'vis-plot.R' 'vis-multichannel.R' 'vis-topomap.R'
        'vis-network.R' 'gui-launcher.R' 'RcppExports.R' 'zzz.R'
Repository: https://x-biosignal.r-universe.dev
Date/Publication: 2026-07-05 09:34:52 UTC
RemoteUrl: https://github.com/x-biosignal/PhysioExperiment
RemoteRef: HEAD
RemoteSha: e350f8a60dc884e11b028f504012c34b213eabe2
NeedsCompilation: yes
Packaged: 2026-07-05 11:32:18 UTC; root
Author: Yusuke Matsui [aut, cre]
Maintainer: Yusuke Matsui <mail.to.matsui@gmail.com>