Package: PhysioExperiment
Title: Shared Data Model for Physiological Signal Analysis
Version: 2.3.1
Authors@R: 
    person(given = "Yusuke",
           family = "Matsui",
           role = c("aut", "cre"),
           email = "mail.to.matsui@gmail.com")
Description: Provides the shared data model for the Physio ecosystem:
        the PhysioExperiment class, a 'SummarizedExperiment' extension
        for multi-modal physiological signal data (such as
        electroencephalography, electromyography, and
        electrocardiography), together with the containers for multiple
        simultaneously recorded streams, repeated sessions of one
        subject, and cohorts of subjects. Includes core accessors,
        channel and event management, provenance, and basic 'S4'
        methods. Domain packages apply specialized methods to these
        shared containers and are installed separately.
biocViews: Software, Infrastructure, DataRepresentation, TimeCourse
Depends: R (>= 4.2)
Imports: methods, SummarizedExperiment, S4Vectors, stats, lifecycle,
        BiocGenerics, digest
Suggests: testthat (>= 3.2.0), abind, ggplot2, farver, colorspace,
        withr, knitr, rmarkdown, BiocStyle, MultiAssayExperiment,
        PhysioMSKNet
VignetteBuilder: knitr
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Collate: 'PhysioExperiment-class.R' 'PhysioExperiment-accessors.R'
        'PhysioExperiment-methods.R' 'provenance.R'
        'MultiPhysioExperiment-class.R' 'container-migration.R'
        'trials.R' 'multirate-accessors.R' 'PhysioLongitudinal-class.R'
        'PhysioCohort-class.R' 'channels.R' 'harmonize.R'
        'change-scores.R' 'events.R' 'event-query.R' 'utils-signal.R'
        'utils-mvar.R' 'utils-na.R' 'clinimetrics.R'
        'analysis-result.R' 'normative.R' 'biomarker.R' 'vis-theme.R'
        'registry.R' 'lifecycle.R' 'stats-circular.R'
        'stats-reliability.R' 'stats-fda.R' 'zzz.R'
RoxygenNote: 7.3.3
URL: https://github.com/x-biosignal/PhysioExperiment,
        https://x-biosignal.r-universe.dev/PhysioExperiment
BugReports: https://github.com/x-biosignal/PhysioExperiment/issues
Config/pak/sysreqs: zlib1g-dev
Repository: https://x-biosignal.r-universe.dev
Date/Publication: 2026-10-03 13:11:53 UTC
RemoteUrl: https://github.com/x-biosignal/PhysioExperiment
RemoteRef: HEAD
RemoteSha: e65059e55edbd9bf0568f094cdeb97124805084c
NeedsCompilation: no
Packaged: 2026-10-03 13:42:10 UTC; root
Author: Yusuke Matsui [aut, cre]
Maintainer: Yusuke Matsui <mail.to.matsui@gmail.com>